Today we added the gene ontology information to the seastar transcriptome contigs.
We ran the count data through deseq2 to find significantly differentially expressed genes.
There were a lot!
Here is today’s notebook:
We then added the uniprot IDs back onto the significantly DEGenes and summarized the resulting information using revigo:
We also ran them through david to find enriched genes:
Interestingly, we see a lot of immune-function related genes! More to come!