Epigenetic variation of two populations grown at common site

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In a different experiment compared to when Fidalgo siblings were outplanted at two sites, we also examined Hood Canal (HC) and Oyster Bay (SS/South Sound) grown at Clam Bay (Manchester). Descriptor. These were the oysters Katherine Silliman spawned in the summer of 2015 and represent seed Jake outplanted years ago. This was run against the… Read more »

CoGe on Fidalgo Sibs

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As per this pipeline I will run the 8 individuals in the environmental epigenetics mini-experiment. — Once complete this is all available in the genome browser

Fidalgo offspring at two locations

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We carried out whole genome BS-Seq on siblings outplanted out at two sites: Fidalgo Bay (home) and Oyster Bay. Four individuals from each locale were examined. A running description of the data is available @ https://github.com/RobertsLab/project-olympia.oyster-genomic/wiki/Whole-genome-BSseq-December-2015. I need to look back to a genome to analyze this. We did some PacBio sequencing a while ago…. Read more »

Data check on Oly BS-Seq samples

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  For the 12 samples Select 4 samples from 1NF gel take 2 Select 4 samples from 2NF gel take 2 Select 2 from gel take 2 Lotterhos M1 M2 M3 Select 2 from the following sent to Katie (do not have to run on gel) NF2 14 NF2 6 NF2 18 NF2 15 NF2… Read more »