Shortish list

Posted by & filed under Ostrea lurida.

In selecting qPCR targets from the Oly transcriptome (version 3) I came up with the following list. In general this was done by first focusing on stress response GO slim terms, followed by simple word searches. The table is available for download here The next step would be some joining & file converting to pull… Read more »

Developing CpG O/E Workflow

Posted by & filed under Workflows.

In an effort to streamline CpG O/E determination across various transcriptomes, here is my latest attempt. tldr; Ahyacinthus = This is dependent on have GO slim annotations for all genes – for this particular case the annotation pipeline can be seen here.