Hyper-splitting

Posted by & filed under Cgigas DNA Methylation.

With a good two weeks hands-off of the the array data it took a bit of time to get back on target. Following up from last time (per my instruction) I began to delve into how the hypomethylated versus hypermethylated DMLs played out with respect to genomic features. Still not convinced I am convoluting the… Read more »

Intersecting DMRs

Posted by & filed under Cgigas DNA Methylation.

To try to determine where the DMRs defined by three *sig.bedGraph files described here are located on genome – intersectbed was used, some steps and … Full notebook @ http://nbviewer.ipython.org/github/sr320/paper-Temp-stress/blob/authorea/ipynb/Array-feature-overlap-02.ipynb tlrs