The samples that CDFW sent us earlier are intended for checking for the presence of the RLOv (phage), but I figured it would be prudent to verify that they were positive for the RLO as well. I ran these samples concurrently with some other samples I had to test with the withering syndrome qPCR assay.
Standard curve was p18RK7 from 20161128.
All samples were run in duplicate.
Master mix calcs are here; since I ran these with the other samples, the master mix used was part of the other project indicated in the spreadsheet (Google Sheet): 20170406_qPCR_WSN1_capstone
Plate layout, cycling params, etc. can be found in the qPCR Report (see Results).
Baseline threshold was manually set to 580, as previously determined by Lisa.
Standard curve looks good and all samples provided come up positive for RLO.
qPCR Report (PDF): Sam_2017-04-06%2011-36-53_CC009827_CDFW_white_ab_WSN1.pdf
qPCR Data File (CFX): Sam_2017-04-06%2011-36-53_CC009827_CDFW_white_ab_WSN1.pcrd
Green = Standard Curve
Blue = Samples
Red = No template control